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    Slc22a8 solute carrier family 22 (organic anion transporter), member 8 [ Mus musculus (house mouse) ]

    Gene ID: 19879, updated on 2-Nov-2024

    Summary

    Official Symbol
    Slc22a8provided by MGI
    Official Full Name
    solute carrier family 22 (organic anion transporter), member 8provided by MGI
    Primary source
    MGI:MGI:1336187
    See related
    Ensembl:ENSMUSG00000063796 AllianceGenome:MGI:1336187
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Oat3; Roct
    Summary
    Enables antiporter activity and organic anion transmembrane transporter activity. Predicted to be involved in glutathione transport; prostaglandin transport; and quaternary ammonium group transport. Predicted to be located in apical plasma membrane and basolateral plasma membrane. Is expressed in several structures, including central nervous system; genitourinary system; liver; spleen; and thyroid gland. Orthologous to human SLC22A8 (solute carrier family 22 member 8). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward kidney adult (RPKM 202.2) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Slc22a8 in Genome Data Viewer
    Location:
    19 A; 19 5.44 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (8568576..8589199)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (8591254..8611835)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 57666 Neighboring gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 pseudogene Neighboring gene predicted gene, 36394 Neighboring gene solute carrier family 22 (organic anion transporter), member 6 Neighboring gene RIKEN cDNA 9830166K06 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in glutathione transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in inorganic anion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in prostaglandin transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in prostaglandin transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in quaternary ammonium group transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to toxic substance IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in xenobiotic transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in basolateral plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in basolateral plasma membrane TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    organic anion transporter 3
    Names
    organic anion/dicarboxylate exchanger
    reduced in osteosclerosis transporter
    solute carrier family 22, member 8

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164634.2NP_001158106.1  organic anion transporter 3 isoform 1

      See identical proteins and their annotated locations for NP_001158106.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
      Source sequence(s)
      AC025794, AC125136
      Consensus CDS
      CCDS29537.1
      UniProtKB/Swiss-Prot
      O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
      Related
      ENSMUSP00000131045.2, ENSMUST00000170817.2
      Conserved Domains (1) summary
      TIGR00898
      Location:11503
      2A0119; cation transport protein
    2. NM_001164635.2NP_001158107.1  organic anion transporter 3 isoform 1

      See identical proteins and their annotated locations for NP_001158107.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
      Source sequence(s)
      AC025794, AC125136
      Consensus CDS
      CCDS29537.1
      UniProtKB/Swiss-Prot
      O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
      Conserved Domains (1) summary
      TIGR00898
      Location:11503
      2A0119; cation transport protein
    3. NM_001411470.1NP_001398399.1  organic anion transporter 3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC025794, AC125136
      UniProtKB/Swiss-Prot
      O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
    4. NM_001411471.1NP_001398400.1  organic anion transporter 3 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC025794, AC125136
    5. NM_001411472.1NP_001398401.1  organic anion transporter 3 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC025794, AC125136
    6. NM_001411473.1NP_001398402.1  organic anion transporter 3 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC025794, AC125136
    7. NM_031194.6NP_112471.3  organic anion transporter 3 isoform 1

      See identical proteins and their annotated locations for NP_112471.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2 and 3 encode the same protein.
      Source sequence(s)
      AC025794, AC125136
      Consensus CDS
      CCDS29537.1
      UniProtKB/Swiss-Prot
      O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
      Related
      ENSMUSP00000010251.4, ENSMUST00000010251.11
      Conserved Domains (1) summary
      TIGR00898
      Location:11503
      2A0119; cation transport protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      8568576..8589199
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004940127.1 RNA Sequence