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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163819.1 → NP_001157291.1 Fanconi anemia group E protein isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
CT025652
- Consensus CDS
-
CCDS89042.1
- UniProtKB/TrEMBL
- B8JJD3, B8JJD5
- Related
- ENSMUSP00000110451.3, ENSMUST00000114803.9
- Conserved Domains (1) summary
-
- cl12008
Location:266 → 524
- FANCE_c-term; Fanconi anemia complementation group E protein, C-terminal domain
-
NM_001163820.1 → NP_001157292.1 Fanconi anemia group E protein isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
CT025652
- Consensus CDS
-
CCDS89043.1
- UniProtKB/TrEMBL
- B8JJD5, F7DAL6
- Related
- ENSMUSP00000110452.5, ENSMUST00000114804.11
- Conserved Domains (1) summary
-
- cl12008
Location:266 → 482
- FANCE_c-term; Fanconi anemia complementation group E protein, C-terminal domain
RNA
-
NR_028296.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal alternate exon and uses an internal alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK013325, AK135017, BY740269, CT025652
- Related
-
ENSMUST00000133527.9
-
NR_028297.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an internal alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC039987, BY740269, CT025652
- Related
-
ENSMUST00000088007.12
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000083.7 Reference GRCm39 C57BL/6J
- Range
-
28532504..28545548
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_028348.1: Suppressed sequence
- Description
- NM_028348.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.