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    ME1 malic enzyme 1 [ Meleagris gallopavo (turkey) ]

    Gene ID: 100125332, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ME1
    Gene description
    malic enzyme 1
    See related
    Ensembl:ENSMGAG00000013739
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Meleagris gallopavo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
    Orthologs
    human mouse all
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    Genomic context

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    See ME1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Turkey_5.1 (GCF_000146605.3) 2 NC_015012.2 (76699587..76856722)
    Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 2 NC_015012.1 (81311108..81468345, complement)

    Chromosome 2 - NC_015012.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104909900 Neighboring gene serine protease 35 Neighboring gene RWD domain containing 2A Neighboring gene phosphoglucomutase 3 Neighboring gene DOP1 leucine zipper like protein A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables malate dehydrogenase (decarboxylating) (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables malate dehydrogenase (decarboxylating) (NADP+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in malate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pyruvate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NADP-dependent malic enzyme
    Names
    malic enzyme 1, NADP(+)-dependent, cytosolic
    NP_001290135.1
    XP_010705975.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001303206.1 → NP_001290135.1  NADP-dependent malic enzyme

      See identical proteins and their annotated locations for NP_001290135.1

      Status: PROVISIONAL

      Source sequence(s)
      AF408406
      UniProtKB/TrEMBL
      Q90XC1
      Related
      ENSMGAP00000014522.3, ENSMGAT00000015458.3
      Conserved Domains (3) summary
      cd05312
      Location:259 → 536
      NAD_bind_1_malic_enz; NAD(P) binding domain of malic enzyme (ME), subgroup 1
      PLN03129
      Location:2 → 542
      PLN03129; NADP-dependent malic enzyme; Provisional
      pfam00390
      Location:68 → 249
      malic; Malic enzyme, N-terminal domain

    RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Turkey_5.1 Primary Assembly

    Genomic

    1. NC_015012.2 Reference Turkey_5.1 Primary Assembly

      Range
      76699587..76856722
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010707673.3 → XP_010705975.1  NADP-dependent malic enzyme isoform X1

      UniProtKB/TrEMBL
      G1NLV4
      Conserved Domains (1) summary
      PLN03129
      Location:21 → 561
      PLN03129; NADP-dependent malic enzyme; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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