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    Platr9 pluripotency associated transcript 9 [ Mus musculus (house mouse) ]

    Gene ID: 73696, updated on 2-Nov-2024

    Summary

    Official Symbol
    Platr9provided by MGI
    Official Full Name
    pluripotency associated transcript 9provided by MGI
    Primary source
    MGI:MGI:1920946
    See related
    Ensembl:ENSMUSG00000085824 AllianceGenome:MGI:1920946
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2410114N07Rik
    Summary
    Is active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Platr9 in Genome Data Viewer
    Location:
    4 A5; 4 16.86 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (34909789..34911481, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (34909789..34911481, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 292 Neighboring gene tubulin, beta 6 pseudogene Neighboring gene STARR-seq mESC enhancer starr_09922 Neighboring gene STARR-seq mESC enhancer starr_09925 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:34833884-34833993 Neighboring gene STARR-seq mESC enhancer starr_09928 Neighboring gene STARR-seq mESC enhancer starr_09932 Neighboring gene glycoprotein hormones, alpha subunit Neighboring gene ubiquitin protein ligase E3 component n-recognin 7 (putative) pseudogene Neighboring gene predicted gene 12362

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040652.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AK010767
      Related
      ENSMUST00000125820.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      34909789..34911481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)