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    lactbl1a lactamase, beta-like 1a [ Danio rerio (zebrafish) ]

    Gene ID: 568717, updated on 12-Sep-2024

    Summary

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    Official Symbol
    lactbl1aprovided by ZNC
    Official Full Name
    lactamase, beta-like 1aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7625
    See related
    Ensembl:ENSDARG00000089063 AllianceGenome:ZFIN:ZDB-GENE-030131-7625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fk56c03; wu:fk56c03; si:dkey-68l7.3
    Summary
    Orthologous to human LACTBL1 (lactamase beta like 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See lactbl1a in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (21964342..21974820)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (22037777..22048279)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137489120 Neighboring gene leucine rich repeat containing 38a Neighboring gene eph receptor B2a Neighboring gene uncharacterized LOC103909685 Neighboring gene eukaryotic translation initiation factor 4 gamma, 3b Neighboring gene polyhomeotic homolog 2a (Drosophila)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    putative beta-lactamase-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      21964342..21974820
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021469952.2 → XP_021325627.1  putative beta-lactamase-like 1

      UniProtKB/TrEMBL
      A0A8M9PE02, E7FAI4
      Conserved Domains (1) summary
      pfam00144
      Location:76 → 420
      Beta-lactamase; Beta-lactamase

    2. XM_021469951.2 → XP_021325626.1  putative beta-lactamase-like 1

      UniProtKB/TrEMBL
      A0A8M9PE02, E7FAI4
      Related
      ENSDARP00000117327.1, ENSDART00000135690.2
      Conserved Domains (1) summary
      pfam00144
      Location:76 → 420
      Beta-lactamase; Beta-lactamase

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395145.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      434566..445044
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021473663.2 → XP_021329338.1  putative beta-lactamase-like 1

      UniProtKB/TrEMBL
      A0A8M9PE02, E7FAI4
      Conserved Domains (1) summary
      pfam00144
      Location:76 → 420
      Beta-lactamase; Beta-lactamase

    2. XM_021473662.2 → XP_021329337.1  putative beta-lactamase-like 1

      UniProtKB/TrEMBL
      A0A8M9PE02, E7FAI4
      Conserved Domains (1) summary
      pfam00144
      Location:76 → 420
      Beta-lactamase; Beta-lactamase

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395362.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      122711..133205
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009296896.3 → XP_009295171.2  putative beta-lactamase-like 1

      UniProtKB/TrEMBL
      A0A8M3AVF4
      Conserved Domains (1) summary
      pfam00144
      Location:76 → 420
      Beta-lactamase

    2. XM_009296895.4 → XP_009295170.2  putative beta-lactamase-like 1

      UniProtKB/TrEMBL
      A0A8M3AVF4
      Conserved Domains (1) summary
      pfam00144
      Location:76 → 420
      Beta-lactamase
    Nucleotide Protein Strain
    Heading Accession and Version

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