U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    plekhb2 pleckstrin homology domain containing, family B (evectins) member 2 [ Danio rerio (zebrafish) ]

    Gene ID: 100003431, updated on 28-Oct-2024

    Summary

    Official Symbol
    plekhb2provided by ZNC
    Official Full Name
    pleckstrin homology domain containing, family B (evectins) member 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-754
    See related
    Ensembl:ENSDARG00000013928 AllianceGenome:ZFIN:ZDB-GENE-040426-754
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:55604; si:dkey-121a11.4
    Summary
    Predicted to be involved in regulation of cell differentiation. Predicted to be active in membrane. Orthologous to human PLEKHB2 (pleckstrin homology domain containing B2). [provided by Alliance of Genome Resources, Oct 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See plekhb2 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (16432934..16443153, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (16406664..16416883, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene laminin, alpha 3 Neighboring gene cathepsin 12 Neighboring gene ankyrin repeat domain 29 Neighboring gene si:dkey-121a11.3 Neighboring gene syntaxin 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC55604

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in regulation of cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    pleckstrin homology domain-containing family B member 2
    Names
    evectin 2
    pleckstrin homology domain containing, family B member 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_201002.1NP_957296.1  pleckstrin homology domain-containing family B member 2

      See identical proteins and their annotated locations for NP_957296.1

      Status: PROVISIONAL

      Source sequence(s)
      BC045398
      UniProtKB/TrEMBL
      Q7ZVV3
      Related
      ENSDARP00000015417.5, ENSDART00000006290.6
      Conserved Domains (2) summary
      cd13265
      Location:1108
      PH_evt; Evectin Pleckstrin homology (PH) domain
      pfam00169
      Location:4107
      PH; PH domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      16432934..16443153 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395100.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      212408..222230 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)