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    btg3 B-cell translocation gene 3 [ Danio rerio (zebrafish) ]

    Gene ID: 492479, updated on 2-Nov-2024

    Summary

    Official Symbol
    btg3provided by ZNC
    Official Full Name
    B-cell translocation gene 3provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-031113-19
    See related
    Ensembl:ENSDARG00000069065 AllianceGenome:ZFIN:ZDB-GENE-031113-19
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    cb928; zgc:103463
    Summary
    Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including immature eye; nervous system; pectoral fin bud; pectoral fin musculature; and segmental plate. Orthologous to human BTG3 (BTG anti-proliferation factor 3). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See btg3 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (28370816..28380919, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (28484191..28494294, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene peptidyl-tRNA hydrolase 2 Neighboring gene clathrin, heavy chain a (Hc) Neighboring gene uncharacterized LOC101882864 Neighboring gene uncharacterized LOC103911752

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007351.2NP_001007352.1  protein BTG3 isoform 2

      See identical proteins and their annotated locations for NP_001007352.1

      Status: VALIDATED

      Source sequence(s)
      CR392341, EH477859, EH478391, EH539756
      UniProtKB/TrEMBL
      B2GQU6, Q5U3I9
      Related
      ENSDARP00000090980.2, ENSDART00000100207.3
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
    2. NM_001326706.1NP_001313635.1  protein BTG3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      CR392341, EH477859, EH478391, EH539756, EH593294
      UniProtKB/TrEMBL
      A0A2R8QIP9, A0A8M1P3L6
      Related
      ENSDARP00000144779.1, ENSDART00000183409.1
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
    3. NM_001326707.1NP_001313636.1  protein BTG3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      CR392341, EH477859, EH478391, EH539756
      UniProtKB/TrEMBL
      A0A2R8QIP9, A0A8M1P3L6
      Related
      ENSDARP00000155564.1, ENSDART00000183105.1
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
    4. NM_001326708.1NP_001313637.1  protein BTG3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      CR392341, EH477859, EH478391, EH539756
      UniProtKB/TrEMBL
      A0A2R8QIP9, A0A8M1P3L6
      Related
      ENSDARP00000152879.1, ENSDART00000185392.1
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      28370816..28380919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394789.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      110613..120454 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)