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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001252444.1 → NP_001239373.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform 1
See identical proteins and their annotated locations for NP_001239373.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2 and 3 encode the same protein.
- Source sequence(s)
-
AI837084, AK012472, BY033661, BY145175
- Consensus CDS
-
CCDS27993.1
- UniProtKB/Swiss-Prot
- Q542A2, Q9CZL1, Q9D787
- UniProtKB/TrEMBL
-
Q8BUY4
- Related
- ENSMUSP00000023455.6, ENSMUST00000023455.14
- Conserved Domains (2) summary
-
- smart00504
Location:42 → 96
- Ubox; Modified RING finger domain
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal ...
-
NM_001252445.1 → NP_001239374.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform 1
See identical proteins and their annotated locations for NP_001239374.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
- Source sequence(s)
-
AC154667, AK161596, BY033661
- Consensus CDS
-
CCDS27993.1
- UniProtKB/Swiss-Prot
- Q542A2, Q9CZL1, Q9D787
- UniProtKB/TrEMBL
-
Q8BUY4
- Related
- ENSMUSP00000155861.2, ENSMUST00000231712.2
- Conserved Domains (2) summary
-
- smart00504
Location:42 → 96
- Ubox; Modified RING finger domain
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal ...
-
NM_001356386.1 → NP_001343315.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC154667
- Conserved Domains (1) summary
-
- cd01923
Location:103 → 262
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
-
NM_144954.3 → NP_659203.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform 1
See identical proteins and their annotated locations for NP_659203.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
- Source sequence(s)
-
AC154667
- Consensus CDS
-
CCDS27993.1
- UniProtKB/Swiss-Prot
- Q542A2, Q9CZL1, Q9D787
- UniProtKB/TrEMBL
-
Q8BUY4
- Related
- ENSMUSP00000131422.3, ENSMUST00000164458.10
- Conserved Domains (2) summary
-
- smart00504
Location:42 → 96
- Ubox; Modified RING finger domain
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
16904419..16929126 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006522447.5 → XP_006522510.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X3
- Conserved Domains (4) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_006522443.5 → XP_006522506.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
- Conserved Domains (4) summary
-
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl00197
Location:281 → 410
- cyclophilin; cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug ...
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_006522445.5 → XP_006522508.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X2
See identical proteins and their annotated locations for XP_006522508.1
- Conserved Domains (1) summary
-
- cd01923
Location:103 → 262
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
-
XM_030249228.1 → XP_030105088.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X2
- Conserved Domains (1) summary
-
- cd01923
Location:103 → 262
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
-
XM_006522446.5 → XP_006522509.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X2
See identical proteins and their annotated locations for XP_006522509.1
- Conserved Domains (1) summary
-
- cd01923
Location:103 → 262
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...