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    lrx-1 LRP X(cross)-hybridizing [ Caenorhabditis elegans ]

    Gene ID: 192091, updated on 28-Oct-2024

    Summary

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    Official Symbol
    lrx-1
    Official Full Name
    LRP X(cross)-hybridizing
    Primary source
    WormBase:WBGene00003075
    Locus tag
    CELE_T04H1.6
    See related
    AllianceGenome:WB:WBGene00003075
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See lrx-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (12252572..12255450)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DNA repair protein rad-50;Zinc-hook domain-containing protein Neighboring gene G patch domain-containing protein 11 Neighboring gene Activin_recp domain-containing protein Neighboring gene Putative UDP-glucuronosyltransferase ugt-55 Neighboring gene Putative UDP-glucuronosyltransferase ugt-56

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    LRP X(cross)-hybridizing
    NP_506072.2
    • Product from WormBase gene class lrx;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12252572..12255450
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073671.6 → NP_506072.2  LRP X(cross)-hybridizing [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506072.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22179
      Conserved Domains (1) summary
      cd00112
      Location:208 → 244
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    Nucleotide Protein
    Heading Accession and Version

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