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    • Showing Current items.

    srh-16 Serpentine Receptor, class H [ Caenorhabditis elegans ]

    Gene ID: 186287, updated on 2-Nov-2024

    Summary

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    Official Symbol
    srh-16
    Official Full Name
    Serpentine Receptor, class H
    Primary source
    WormBase:WBGene00005241
    Locus tag
    CELE_F55C5.9
    See related
    AllianceGenome:WB:WBGene00005241
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See srh-16 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (12291861..12294196)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene PX domain-containing protein Neighboring gene Signal recognition particle subunit SRP68 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. Robertson HM. Genome Res, 2000 Feb. PMID 10673277
    2. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class H
    NP_506084.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12291861..12294196
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073683.3 → NP_506084.2  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506084.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20814
      Conserved Domains (1) summary
      cl11665
      Location:13 → 314
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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