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    COX4I1 cytochrome c oxidase subunit 4I1 [ Gallus gallus (chicken) ]

    Gene ID: 415826, updated on 6-Oct-2024

    Summary

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    Symbol
    COX4I1provided by CGNC
    Full Name
    cytochrome c oxidase subunit 4I1provided by CGNC
    Primary source
    CGNC:4285
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    COX4I2
    Orthologs
    human mouse all
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    Genomic context

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    See COX4I1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (17257331..17261423, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (17604867..17608957, complement)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 8 Neighboring gene dual specificity protein phosphatase 22-A-like Neighboring gene ER membrane protein complex subunit 8 Neighboring gene GINS complex subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome c oxidase subunit 4 isoform 1, mitochondrial
    Names
    cytochrome c oxidase subunit 4I2
    cytochrome c oxidase subunit IV
    NP_001025748.1
    XP_015148044.1
    XP_040563029.1
    XP_040563030.1
    XP_046781537.1
    XP_046781538.1
    XP_046781539.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030577.2 → NP_001025748.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial

      See identical proteins and their annotated locations for NP_001025748.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000248
      UniProtKB/TrEMBL
      Q5ZJV5
      Conserved Domains (1) summary
      pfam02936
      Location:38 → 170
      COX4; Cytochrome c oxidase subunit IV

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      17257331..17261423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015292558.3 → XP_015148044.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      Q5ZJV5
      Conserved Domains (1) summary
      pfam02936
      Location:38 → 170
      COX4; Cytochrome c oxidase subunit IV

    2. XM_040707095.2 → XP_040563029.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      Q5ZJV5
      Conserved Domains (1) summary
      pfam02936
      Location:38 → 170
      COX4; Cytochrome c oxidase subunit IV

    3. XM_040707096.2 → XP_040563030.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      Q5ZJV5
      Conserved Domains (1) summary
      pfam02936
      Location:38 → 170
      COX4; Cytochrome c oxidase subunit IV

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      17604867..17608957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925581.1 → XP_046781537.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      Q5ZJV5

    2. XM_046925582.1 → XP_046781538.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      Q5ZJV5

    3. XM_046925583.1 → XP_046781539.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      Q5ZJV5
    Nucleotide Protein Strain
    Heading Accession and Version

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