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    LOC4349341 putative lipid-binding protein AIR1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349341, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349341
    Gene description
    putative lipid-binding protein AIR1
    Locus tag
    OSNPB_100554800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349341 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (22478588..22479510)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (21786053..21787038)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene protein NRT1/ PTR FAMILY 6.3 Neighboring gene flavin-containing monooxygenase FMO GS-OX-like 2 Neighboring gene QWRF motif-containing protein 7 Neighboring gene putative glucuronosyltransferase PGSIP7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative lipid-binding protein AIR1
    Names
    Os10g0554800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      22478588..22479510
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015758537.3 → XP_015614023.1  putative lipid-binding protein AIR1

      UniProtKB/TrEMBL
      A0A068Q714, A0A5S6RDU9, A0A9K3Y754, A3C768, Q0IVT5, Q108Z8
      Conserved Domains (1) summary
      cd01958
      Location:84 → 166
      HPS_like; Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members ...
    Nucleotide Protein
    Heading Accession and Version

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