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    asmA putative assembly protein AsmA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946582, updated on 19-Sep-2024

    Summary

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    Official Symbol
    asmA
    Official Full Name
    putative assembly protein AsmA
    Primary source
    ECOCYC:EG11361
    Locus tag
    b2064
    See related
    ASAP:ABE-0006833
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2058; yegA
    Summary
    AsmA is involved in the assembly of outer membrane proteins, possibly by affecting outer membrane structure. [More information is available at EcoCyc: EG11361].
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    Genomic context

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    Sequence:
    NC_000913.3 (2139759..2141612, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene outer membrane polysaccharide export protein Wza Neighboring gene inner membrane protein YegH Neighboring gene dCTP deaminase Neighboring gene uridine/cytidine kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. dcd (dCTP deaminase) gene of Escherichia coli: mapping, cloning, sequencing, and identification as a locus of suppressors of lethal dut (dUTPase) mutations. Wang L, et al. J Bacteriol, 1992 Sep. PMID 1324907, Free PMC Article
    2. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    3. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    4. Assembly-defective OmpC mutants of Escherichia coli K-12. Xiong X, et al. J Bacteriol, 1996 Feb. PMID 8576061, Free PMC Article
    5. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in regulation of protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within regulation of protein targeting to membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative assembly protein AsmA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2139759..2141612 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416568.1 putative assembly protein AsmA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416568.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A830SHJ2
      Conserved Domains (1) summary
      PRK10833
      Location:1 → 617
      PRK10833; putative assembly protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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