U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    smim7.L small integral membrane protein 7 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 447340, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    smim7.L
    Official Full Name
    small integral membrane protein 7 L homeolog
    Primary source
    Xenbase:XB-GENE-6254005
    Locus tag
    XELAEV_18006677mg
    See related
    EnsemblRapid:ENSXLAG00005035597
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    smim7; smim7-b; smim7.S; c19orf42-b
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See smim7.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (124905228..124920007, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (112590511..112605401, complement)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E1 L homeolog Neighboring gene mediator complex subunit 26 L homeolog Neighboring gene transmembrane protein 38A L homeolog Neighboring gene topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase L homeolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC83341

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    small integral membrane protein 7-B
    Names
    UPF0608 protein C19orf42 homolog B
    small integral membrane protein 7 S homeolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      124905228..124920007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018247694.2 → XP_018103183.1  small integral membrane protein 7-B

      UniProtKB/Swiss-Prot
      Q68F00, Q6INP0
      Related
      ENSXLAP00005106362.1, ENSXLAT00005108461.1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001094047.1: Suppressed sequence

      Description
      NM_001094047.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q68F00.1 GenPept UniProtKB/Swiss-Prot:Q68F00

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.