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    fkbp9.S FKBP prolyl isomerase 9 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379640, updated on 17-Aug-2024

    Summary

    Official Symbol
    fkbp9.S
    Official Full Name
    FKBP prolyl isomerase 9 S homeolog
    Primary source
    Xenbase:XB-GENE-17342135
    Locus tag
    XELAEV_18042785mg
    See related
    EnsemblRapid:ENSXLAG00005032052
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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    Genomic context

    See fkbp9.S in Genome Data Viewer
    Location:
    chromosome: 8S
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8S NC_054386.1 (98513022..98530122)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8S NC_030739.1 (93470462..93487774)

    Chromosome 8S - NC_054386.1Genomic Context describing neighboring genes Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 S homeolog Neighboring gene RAB25, member RAS oncogene family S homeolog Neighboring gene circadian-associated transcriptional repressor Neighboring gene carbonic anhydrase 14 S homeolog

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC68882

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC379640

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086480.1NP_001079949.1  uncharacterized protein LOC379640 precursor

      See identical proteins and their annotated locations for NP_001079949.1

      Status: PREDICTED

      Source sequence(s)
      BC057719
      UniProtKB/TrEMBL
      A0A974C4M6, Q6PF58, Q7ZYL0
      Related
      ENSXLAP00005096153.1, ENSXLAT00005097920.1
      Conserved Domains (3) summary
      cd00051
      Location:509570
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      pfam00254
      Location:59151
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
      pfam13499
      Location:508571
      EF-hand_7; EF-hand domain pair

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      98513022..98530122
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)