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    tmem169.L transmembrane protein 169 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 414651, updated on 4-Nov-2024

    Summary

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    Official Symbol
    tmem169.L
    Official Full Name
    transmembrane protein 169 L homeolog
    Primary source
    Xenbase:XB-GENE-6252285
    Locus tag
    XELAEV_18044411mg
    See related
    EnsemblRapid:ENSXLAG00005017263 AllianceGenome:Xenbase:XB-GENE-6252285
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    tmem169
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM169 (transmembrane protein 169). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See tmem169.L in Genome Data Viewer
    Location:
    chromosome: 9_10L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (59441182..59447372)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (48836820..48843283)

    Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 2 L homeolog Neighboring gene peroxisomal trans-2-enoyl-CoA reductase-like Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 5 L homeolog Neighboring gene membrane associated ring-CH-type finger 4 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC81142

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 169 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001091221.1 → NP_001084690.1  transmembrane protein 169 L homeolog

      See identical proteins and their annotated locations for NP_001084690.1

      Status: PROVISIONAL

      Source sequence(s)
      BC068709
      UniProtKB/TrEMBL
      A0A974BYG3, Q6NU88
      Conserved Domains (1) summary
      pfam15052
      Location:167 → 291
      TMEM169; TMEM169 protein family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      59441182..59447372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018234235.2 → XP_018089724.1  transmembrane protein 169 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A974BYG3, Q6NU88
      Related
      ENSXLAP00005050893.1, ENSXLAT00005052055.1

    2. XM_018234234.2 → XP_018089723.1  transmembrane protein 169 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A974BYG3, Q6NU88
    Nucleotide Protein Strain
    Heading Accession and Version

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