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    rnf26 ring finger protein 26 [ Danio rerio (zebrafish) ]

    Gene ID: 793090, updated on 2-Nov-2024

    Summary

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    Official Symbol
    rnf26provided by ZNC
    Official Full Name
    ring finger protein 26provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060727-1
    See related
    Ensembl:ENSDARG00000074074 AllianceGenome:ZFIN:ZDB-GENE-060727-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination and ubiquitin-dependent protein catabolic process. Predicted to be located in membrane. Orthologous to human RNF26 (ring finger protein 26). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See rnf26 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (23356693..23361285)
    105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (23421276..23424839)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene Cbl proto-oncogene, E3 ubiquitin protein ligase Neighboring gene melanoma cell adhesion molecule b Neighboring gene C1q and TNF related 5 Neighboring gene lysine (K)-specific methyltransferase 2A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ubiquitin protein ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RING finger protein 26; E3 ubiquitin-protein ligase RNF26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      23356693..23361285
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005157594.5 → XP_005157651.1  E3 ubiquitin-protein ligase RNF26

      UniProtKB/TrEMBL
      A0A8M2B4F7, F1QZ63
      Related
      ENSDARP00000102151.3, ENSDART00000113279.4
      Conserved Domains (1) summary
      pfam13920
      Location:370 → 422
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
    Nucleotide Protein Strain
    Heading Accession and Version

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