ybey ybeY metalloendoribonuclease [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ybeyprovided by ZNC
Official Full Name: ybeY metalloendoribonucleaseprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-437
See related: Ensembl:ENSDARG00000011999 AllianceGenome:ZFIN:ZDB-GENE-030131-437
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fb30h03; zgc:85702; wu:fb30h03
Summary: Predicted to enable endonuclease activity; metal ion binding activity; and metalloendopeptidase activity. Predicted to act upstream of or within rRNA processing. Orthologous to human YBEY (ybeY metalloendoribonuclease). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 9

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (711822..715241)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (712189..715608)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AI416005 (e-PCR)
- UniSTS:206632

fb30h03.x1 (e-PCR)
- UniSTS:190398

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables endonuclease activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables metalloendopeptidase activity	IEA Inferred from Electronic Annotation more info
enables nuclease activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within rRNA processing	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: endoribonuclease YbeY

Names: ybeY metallopeptidase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.