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    SUGCT-AS1 SUGCT antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101928716, updated on 17-Sep-2024

    Summary

    Official Symbol
    SUGCT-AS1provided by HGNC
    Official Full Name
    SUGCT antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:40745
    See related
    Ensembl:ENSG00000203446 AllianceGenome:HGNC:40745
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See SUGCT-AS1 in Genome Data Viewer
    Location:
    7p14.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (40538008..40547019, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (40695804..40704804, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (40577607..40586618, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene THUMP domain containing 3 pseudogene 1 Neighboring gene succinyl-CoA:glutarate-CoA transferase Neighboring gene uncharacterized LOC105375245 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25891 Neighboring gene MPRA-validated peak6500 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25892 Neighboring gene Sharpr-MPRA regulatory region 14136 Neighboring gene uncharacterized LOC105375244 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:40608892-40609475 Neighboring gene uncharacterized LOC105375243 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:40750799-40751998 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:40756566-40757765

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_183314.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC004988
      Related
      ENST00000415237.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      40538008..40547019 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      40695804..40704804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)