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    Mst1 macrophage stimulating 1 (hepatocyte growth factor-like) [ Mus musculus (house mouse) ]

    Gene ID: 15235, updated on 12-Nov-2024

    Summary

    Official Symbol
    Mst1provided by MGI
    Official Full Name
    macrophage stimulating 1 (hepatocyte growth factor-like)provided by MGI
    Primary source
    MGI:MGI:96080
    See related
    Ensembl:ENSMUSG00000032591 AllianceGenome:MGI:96080
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hgfl; D3F15S2h; DNF15S2h; D9H3F15S2
    Summary
    Predicted to enable histone kinase activity and receptor tyrosine kinase binding activity. Acts upstream of or within several processes, including embryo implantation; mammary duct terminal end bud growth; and positive regulation of mammary gland epithelial cell proliferation. Located in vacuole. Is expressed in foregut epithelium; liver; and uterus. Orthologous to several human genes including MST1 (macrophage stimulating 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in liver adult (RPKM 91.5), liver E18 (RPKM 53.6) and 2 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mst1 in Genome Data Viewer
    Location:
    9 F1; 9 59.07 cM
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (107957607..107962226)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (108080409..108085027)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E6803 Neighboring gene STARR-positive B cell enhancer ABC_E3859 Neighboring gene GDP-mannose pyrophosphorylase B Neighboring gene ring finger protein 123 Neighboring gene adhesion molecule with Ig like domain 3 Neighboring gene microRNA 7088 Neighboring gene STARR-positive B cell enhancer ABC_E2914 Neighboring gene acylpeptide hydrolase Neighboring gene bassoon Neighboring gene RIKEN cDNA 4930447F24 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    NOT enables endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables histone kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables receptor tyrosine kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables receptor tyrosine kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables receptor tyrosine kinase binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to type II interferon IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within embryo implantation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in flagellated sperm motility IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within mammary duct terminal end bud growth IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within mammary gland development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of epithelial cell apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of gluconeogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of mammary gland epithelial cell proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein modification process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein modification process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of cAMP-dependent protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within regulation of macrophage chemotaxis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of receptor signaling pathway via JAK-STAT IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within regulation of receptor signaling pathway via JAK-STAT IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in vacuole IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    hepatocyte growth factor-like protein
    Names
    MSP
    macrophage stimulatory protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008243.3NP_032269.3  hepatocyte growth factor-like protein precursor

      See identical proteins and their annotated locations for NP_032269.3

      Status: VALIDATED

      Source sequence(s)
      AC137678, AK134222, M74181
      Consensus CDS
      CCDS40766.1
      UniProtKB/Swiss-Prot
      P26928, Q6GTL1
      UniProtKB/TrEMBL
      Q3UZ05
      Related
      ENSMUSP00000035211.8, ENSMUST00000035211.14
      Conserved Domains (4) summary
      smart00020
      Location:488709
      Tryp_SPc; Trypsin-like serine protease
      smart00130
      Location:377459
      KR; Kringle domain
      cd00190
      Location:489712
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam00024
      Location:2596
      PAN_1; PAN domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      107957607..107962226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006511639.5XP_006511702.2  hepatocyte growth factor-like protein isoform X1

      Conserved Domains (3) summary
      smart00130
      Location:400482
      KR; Kringle domain
      pfam00051
      Location:191268
      Kringle; Kringle domain
      pfam00024
      Location:2596
      PAN_1; PAN domain
    2. XM_011242856.4XP_011241158.1  hepatocyte growth factor-like protein isoform X2

      Conserved Domains (1) summary
      cd00190
      Location:231454
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    3. XM_030244059.1XP_030099919.1  hepatocyte growth factor-like protein isoform X3

      Conserved Domains (3) summary
      smart00130
      Location:46128
      KR; Kringle domain
      cd00190
      Location:158381
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      cl00100
      Location:439
      KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
    4. XM_030244060.1XP_030099920.1  hepatocyte growth factor-like protein isoform X4

      Conserved Domains (1) summary
      cd00190
      Location:143366
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...