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    CG42382 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35938, updated on 2-Nov-2024

    Summary

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    Official Symbol
    CG42382provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259728
    Locus tag
    Dmel_CG42382
    See related
    AllianceGenome:FB:FBgn0259728
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG8016; Dmel\CG42382
    Old locus tag
    Dmel_CG8016
    Summary
    Predicted to enable metal ion binding activity. Predicted to be active in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    all
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    Genomic context

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    See CG42382 in Genome Data Viewer
    Location:
    45B1-45B1; 2-60 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (9166566..9167508, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (5054071..5055013, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44283 Neighboring gene uncharacterized protein Neighboring gene Rad51 recombinase D Neighboring gene Receptor mediated endocytosis 8 Neighboring gene Rab32 Neighboring gene long non-coding RNA:CR44284

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [Drosophila gene rad201 controls cell cycle arrest in irradiated cells]. Khromykh IuM, et al. Genetika, 2001 Jun. PMID 11517775
    2. [Epigenetic effect of the rad201(G1) mutation in a system with mobilization of nonautonomous P elements in Drosophila]. Khromykh IuM, et al. Genetika, 2008 Mar. PMID 18664138
    3. Drosophila SPF45: a bifunctional protein with roles in both splicing and DNA repair. Chaouki AS, et al. PLoS Genet, 2006 Dec 8. PMID 17154718, Free PMC Article
    4. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. rad201 gene is involved in the control of the cell cycle
      Title: [Drosophila gene rad201 controls cell cycle arrest in irradiated cells].
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42382-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      9166566..9167508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078941.5 → NP_523665.2  uncharacterized protein Dmel_CG42382 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523665.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7R9, B3DN98
      Related
      FBpp0289271
      Conserved Domains (1) summary
      smart00356
      Location:91 → 116
      ZnF_C3H1; zinc finger
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z7R9 A1Z7R9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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