U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gm41959 predicted gene, 41959 [ Mus musculus (house mouse) ]

    Gene ID: 105246715, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Gm41959provided by MGI
    Official Full Name
    predicted gene, 41959provided by MGI
    Primary source
    MGI:MGI:5624844
    See related
    AllianceGenome:MGI:5624844
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Gm41959 in Genome Data Viewer
    Location:
    1 E4; 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (137845426..137897658, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_02454 Neighboring gene predicted gene, 22727 Neighboring gene predicted gene, 34306 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:139703345-139703646 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:139709614-139709797 Neighboring gene STARR-seq mESC enhancer starr_02455 Neighboring gene STARR-positive B cell enhancer ABC_E5808 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:139795126-139795327 Neighboring gene STARR-seq mESC enhancer starr_02457 Neighboring gene STARR-positive B cell enhancer mm9_chr1:139814060-139814360 Neighboring gene STARR-positive B cell enhancer ABC_E3305 Neighboring gene predicted gene 4258 Neighboring gene microRNA 181a-1 Neighboring gene microRNA 181b-1 Neighboring gene predicted gene, 34353 Neighboring gene STARR-positive B cell enhancer mm9_chr1:139941089-139941390 Neighboring gene STARR-seq mESC enhancer starr_02458 Neighboring gene STARR-seq mESC enhancer starr_02459 Neighboring gene protein tyrosine phosphatase receptor type C Neighboring gene STARR-positive B cell enhancer ABC_E7753 Neighboring gene STARR-positive B cell enhancer ABC_E11693 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:140033032-140033324 Neighboring gene STARR-positive B cell enhancer ABC_E3306 Neighboring gene RIKEN cDNA A130071D04 gene

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000067.7 Chromosome 1 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      137845426..137897658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004935427.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Research Materials