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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163749.1 → NP_001157221.1 calmodulin-regulated spectrin-associated protein 3 isoform 1
See identical proteins and their annotated locations for NP_001157221.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) lacks two exons and uses an alternate in-frame splice site in the 5' coding region compared to variant 3. The encoded isoform (1) is shorter than isoform 3.
- Source sequence(s)
-
AK081728, BC043081, CD349198, CO042496
- Consensus CDS
-
CCDS52469.1
- UniProtKB/Swiss-Prot
-
Q80VC9
- Related
- ENSMUSP00000125993.2, ENSMUST00000171962.3
- Conserved Domains (3) summary
-
- pfam08683
Location:1114 → 1232
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:214 → 296
- CAMSAP_CH; CAMSAP CH domain
- pfam17095
Location:588 → 645
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
-
NM_001347111.1 → NP_001334040.1 calmodulin-regulated spectrin-associated protein 3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AC170806, CO042496, KC426931
- Consensus CDS
-
CCDS85488.1
- UniProtKB/Swiss-Prot
-
Q80VC9
- Related
- ENSMUSP00000146896.2, ENSMUST00000207432.2
-
NM_001347112.1 → NP_001334041.1 calmodulin-regulated spectrin-associated protein 3 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an in-frame exon in the 5' coding region compared to variant 3. The encoded isoform (4) is shorter than isoform 3.
- Source sequence(s)
-
AC170806, CO042496, KC426933
- Consensus CDS
-
CCDS85490.1
- UniProtKB/Swiss-Prot
-
Q80VC9
- Related
- ENSMUSP00000146852.2, ENSMUST00000207077.2
-
NM_001347113.1 → NP_001334042.1 calmodulin-regulated spectrin-associated protein 3 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an in-frame exon in the 5' coding region compared to variant 3. The encoded isoform (5) is shorter than isoform 3.
- Source sequence(s)
-
AC170806, CO042496, KC426935
- Consensus CDS
-
CCDS85489.1
- UniProtKB/Swiss-Prot
-
Q80VC9
- Related
- ENSMUSP00000146772.2, ENSMUST00000207970.2
-
NM_001363239.1 → NP_001350168.1 calmodulin-regulated spectrin-associated protein 3 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (6) summary
-
- smart01051
Location:1140 → 1268
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam08580
Location:398 → 618
- KAR9; Yeast cortical protein KAR9
- pfam11971
Location:241 → 323
- CAMSAP_CH; CAMSAP CH domain
- pfam17095
Location:615 → 672
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
- cl25548
Location:899 → 967
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:922 → 1020
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001363240.1 → NP_001350169.1 calmodulin-regulated spectrin-associated protein 3 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (6) summary
-
- smart01051
Location:1129 → 1257
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam08580
Location:387 → 607
- KAR9; Yeast cortical protein KAR9
- pfam11971
Location:230 → 312
- CAMSAP_CH; CAMSAP CH domain
- pfam17095
Location:604 → 661
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
- cl25548
Location:888 → 956
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:911 → 1009
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001363241.1 → NP_001350170.1 calmodulin-regulated spectrin-associated protein 3 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (6) summary
-
- smart01051
Location:1124 → 1252
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam08580
Location:382 → 602
- KAR9; Yeast cortical protein KAR9
- pfam11971
Location:225 → 307
- CAMSAP_CH; CAMSAP CH domain
- pfam17095
Location:599 → 656
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
- cl25548
Location:883 → 951
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:906 → 1004
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001363242.1 → NP_001350171.1 calmodulin-regulated spectrin-associated protein 3 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (5) summary
-
- smart01051
Location:724 → 852
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:241 → 323
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:483 → 551
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:506 → 604
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:355 → 581
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_001363243.1 → NP_001350172.1 calmodulin-regulated spectrin-associated protein 3 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (5) summary
-
- smart01051
Location:723 → 851
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:241 → 323
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:482 → 550
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:505 → 603
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:377 → 580
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_001363244.1 → NP_001350173.1 calmodulin-regulated spectrin-associated protein 3 isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (5) summary
-
- smart01051
Location:713 → 841
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:230 → 312
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:472 → 540
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:495 → 593
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:344 → 570
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_001363245.1 → NP_001350174.1 calmodulin-regulated spectrin-associated protein 3 isoform 12
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Consensus CDS
-
CCDS90366.1
- Related
- ENSMUSP00000147209.2, ENSMUST00000207533.2
- Conserved Domains (5) summary
-
- smart01051
Location:712 → 840
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:230 → 312
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:471 → 539
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:494 → 592
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:366 → 569
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_001363246.1 → NP_001350175.1 calmodulin-regulated spectrin-associated protein 3 isoform 13
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Consensus CDS
-
CCDS90365.1
- Related
- ENSMUSP00000146359.2, ENSMUST00000208240.2
- Conserved Domains (5) summary
-
- smart01051
Location:708 → 836
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:225 → 307
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:467 → 535
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:490 → 588
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:339 → 565
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_001363247.1 → NP_001350176.1 calmodulin-regulated spectrin-associated protein 3 isoform 14
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (5) summary
-
- smart01051
Location:707 → 835
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:225 → 307
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:466 → 534
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:489 → 587
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:361 → 564
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_001363248.1 → NP_001350177.1 calmodulin-regulated spectrin-associated protein 3 isoform 15
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Consensus CDS
-
CCDS90367.1
- Related
- ENSMUSP00000146565.2, ENSMUST00000207712.2
- Conserved Domains (5) summary
-
- smart01051
Location:697 → 825
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:214 → 296
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:456 → 524
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:479 → 577
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:328 → 554
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_001363249.1 → NP_001350178.1 calmodulin-regulated spectrin-associated protein 3 isoform 16
Status: VALIDATED
- Source sequence(s)
-
AC170806
- Conserved Domains (5) summary
-
- smart01051
Location:696 → 824
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:214 → 296
- CAMSAP_CH; CAMSAP CH domain
- cl25548
Location:455 → 523
- DUF4670; Domain of unknown function (DUF4670)
- cl25732
Location:478 → 576
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28087
Location:350 → 553
- FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
-
NM_027171.3 → NP_081447.2 calmodulin-regulated spectrin-associated protein 3 isoform 2
See identical proteins and their annotated locations for NP_081447.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks two exons in the 5' coding region compared to variant 3. The encoded isoform (2) is shorter than isoform 3.
- Source sequence(s)
-
AK081728, BC043081, CD349198, CO042496
- Consensus CDS
-
CCDS22064.1
- UniProtKB/Swiss-Prot
- E9Q5B0, Q5DTW9, Q80VC9, Q8BUZ0, U5LGR7, U5LGS1, U5LGS5, U5LGT0, U5LHT8, U5LHU4, U5LHW1, U5LHW4, U5LHW9, U5LK15, U5LK19, U5LK24, U5LK70, U5LK74, U5LK79
- Related
- ENSMUSP00000058958.8, ENSMUST00000057028.15
- Conserved Domains (3) summary
-
- pfam08683
Location:1113 → 1231
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam11971
Location:214 → 296
- CAMSAP_CH; CAMSAP CH domain
- pfam17095
Location:587 → 644
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000074.7 Reference GRCm39 C57BL/6J
- Range
-
3637237..3659075
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006508880.2 → XP_006508943.1 calmodulin-regulated spectrin-associated protein 3 isoform X1
- Conserved Domains (5) summary
-
- PRK02224
Location:905 → 1003
- PRK02224; DNA double-strand break repair Rad50 ATPase
- pfam11971
Location:241 → 323
- CAMSAP_CH; CAMSAP CH domain
- pfam02029
Location:838 → 950
- Caldesmon
- pfam08683
Location:1124 → 1242
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam17095
Location:598 → 655
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
-
XM_036154273.1 → XP_036010166.1 calmodulin-regulated spectrin-associated protein 3 isoform X2
- Conserved Domains (5) summary
-
- PRK02224
Location:904 → 1002
- PRK02224; DNA double-strand break repair Rad50 ATPase
- pfam11971
Location:241 → 323
- CAMSAP_CH; CAMSAP CH domain
- pfam08683
Location:1123 → 1241
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam17095
Location:597 → 654
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
- cl28905
Location:910 → 948
- PIN_SF; PIN (PilT N terminus) domain: Superfamily
-
XM_030243752.1 → XP_030099612.1 calmodulin-regulated spectrin-associated protein 3 isoform X3
- Conserved Domains (5) summary
-
- PRK02224
Location:888 → 986
- PRK02224; DNA double-strand break repair Rad50 ATPase
- pfam11971
Location:225 → 307
- CAMSAP_CH; CAMSAP CH domain
- pfam02029
Location:821 → 933
- Caldesmon
- pfam08683
Location:1107 → 1225
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam17095
Location:581 → 638
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
-
XM_006508881.2 → XP_006508944.1 calmodulin-regulated spectrin-associated protein 3 isoform X4
- Conserved Domains (5) summary
-
- PRK02224
Location:789 → 887
- PRK02224; DNA double-strand break repair Rad50 ATPase
- pfam11971
Location:108 → 190
- CAMSAP_CH; CAMSAP CH domain
- pfam02029
Location:722 → 834
- Caldesmon
- pfam08683
Location:1008 → 1126
- CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
- pfam17095
Location:482 → 539
- CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin