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    LOC107987020 uncharacterized LOC107987020 [ Homo sapiens (human) ]

    Gene ID: 107987020, updated on 27-Aug-2024

    Summary

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    Gene symbol
    LOC107987020
    Gene description
    uncharacterized LOC107987020
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in spleen (RPKM 3.6), brain (RPKM 2.2) and 21 other tissues See more
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    Genomic context

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    See LOC107987020 in Genome Data Viewer
    Location:
    9q13
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (62800841..62802360, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene short chain dehydrogenase/reductase family 42E, member 1 pseudogene 3 Neighboring gene FKBP prolyl isomerase 4 pseudogene 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:47049006-47049525 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:47049526-47050044 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28431 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66455492-66456238 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66456239-66456984 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66457043-66457922 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66457923-66458800 Neighboring gene long intergenic non-protein coding RNA 1410 Neighboring gene RNA, 5S ribosomal pseudogene 283 Neighboring gene OCT4 hESC enhancer GRCh37_chr9:66464814-66465421 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:66470759-66471281 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:66478631-66479190 Neighboring gene PTGER4P2-CDK2AP2P2 readthrough, transcribed pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66486627-66487478 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66489090-66489619 Neighboring gene uncharacterized LOC100132249 Neighboring gene MPRA-validated peak7249 silencer Neighboring gene Sharpr-MPRA regulatory region 15656 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19925 Neighboring gene prostaglandin E receptor 4 pseudogene 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000009.12 Chromosome 9 Reference GRCh38.p14 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    Genotypes

    General protein information

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    Preferred Names
    uncharacterized protein LOC107987020

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      62800841..62802360 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047424300.1 → XP_047280256.1  uncharacterized protein LOC107987020

    Nucleotide Protein
    Heading Accession and Version

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