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    esm1 endothelial cell-specific molecule 1 [ Danio rerio (zebrafish) ]

    Gene ID: 767774, updated on 2-Nov-2024

    Summary

    Official Symbol
    esm1provided by ZNC
    Official Full Name
    endothelial cell-specific molecule 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060929-748
    See related
    Ensembl:ENSDARG00000104370 AllianceGenome:ZFIN:ZDB-GENE-060929-748
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:153027
    Summary
    Predicted to be located in extracellular region. Is expressed in dorsal aorta and intersegmental vessel. Orthologous to human ESM1 (endothelial cell specific molecule 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See esm1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (9987313..9991502, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (9894580..9898861, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 10 Neighboring gene Rho GTPase activating protein 24 Neighboring gene probable E3 ubiquitin-protein ligase HERC1 Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    endothelial cell-specific molecule 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076741.1NP_001070209.1  endothelial cell-specific molecule 1 precursor

      See identical proteins and their annotated locations for NP_001070209.1

      Status: PROVISIONAL

      Source sequence(s)
      BC124217
      UniProtKB/TrEMBL
      Q08CJ3
      Related
      ENSDARP00000132994.1, ENSDART00000169320.2
      Conserved Domains (1) summary
      pfam00219
      Location:3186
      IGFBP; Insulin-like growth factor binding protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      9987313..9991502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)