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    Gpx5 glutathione peroxidase 5 [ Mus musculus (house mouse) ]

    Gene ID: 14780, updated on 2-Nov-2024

    Summary

    Official Symbol
    Gpx5provided by MGI
    Official Full Name
    glutathione peroxidase 5provided by MGI
    Primary source
    MGI:MGI:104886
    See related
    Ensembl:ENSMUSG00000004344 AllianceGenome:MGI:104886
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arep
    Summary
    Predicted to enable glutathione peroxidase activity. Acts upstream of or within cellular response to oxidative stress. Located in extracellular space and sperm plasma membrane. Is expressed in several structures, including male reproductive gland or organ and placenta. Orthologous to human GPX5 (glutathione peroxidase 5). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 3445.3) See more
    Orthologs
    NEW
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    Genomic context

    See Gpx5 in Genome Data Viewer
    Location:
    13 A3.1; 13 7.73 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (21470599..21476897, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (21286429..21292727, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA threonine 4 (anticodon TGT) Neighboring gene nuclear encoded tRNA arginine 2 (anticodon TCG) Neighboring gene STARR-seq mESC enhancer starr_33847 Neighboring gene ribosomal protein L29 pseudogene Neighboring gene glutathione peroxidase 6 Neighboring gene nuclear encoded tRNA threonine 4 (anticodon CGT)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (4)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC124090, MGC124091, MGC124177

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables glutathione peroxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables glutathione peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cellular oxidant detoxification IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cellular response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in sperm plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    epididymal secretory glutathione peroxidase
    Names
    EGLP
    GPx-5
    GSHPx-5
    arMEP24
    epididymis-specific glutathione peroxidase-like protein
    lysosomal trafficking regulator, long splice form
    major androgen-regulated protein
    NP_034473.2
    XP_011242585.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010343.2NP_034473.2  epididymal secretory glutathione peroxidase precursor

      See identical proteins and their annotated locations for NP_034473.2

      Status: VALIDATED

      Source sequence(s)
      AK029731, AK033841, BC105648
      Consensus CDS
      CCDS26270.1
      UniProtKB/Swiss-Prot
      E9QK84, P21765
      UniProtKB/TrEMBL
      Q496Q2, Q8CDQ5
      Related
      ENSMUSP00000106117.3, ENSMUST00000110491.9
      Conserved Domains (1) summary
      cd00340
      Location:39211
      GSH_Peroxidase; Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      21470599..21476897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244283.3XP_011242585.1  epididymal secretory glutathione peroxidase isoform X1

      Conserved Domains (1) summary
      cl00388
      Location:5698
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold