orc5.L origin recognition complex subunit 5 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: orc5.L
Official Full Name: origin recognition complex subunit 5 L homeolog
Primary source: Xenbase:XB-GENE-954704
Locus tag: XELAEV_18032103mg
See related: EnsemblRapid:ENSXLAG00005017101
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: orc5; orc5l
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Genomic context

Location:: chromosome: 6L

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (128817741..128837394, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (121529168..121580933, complement)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA replication origin binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA replication	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within DNA replication initiation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of nuclear origin of replication recognition complex	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of origin recognition complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: origin recognition complex subunit 5 L homeolog

Names: origin recognition complex, subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095975.1 → NP_001089444.1 origin recognition complex subunit 5 L homeolog

See identical proteins and their annotated locations for NP_001089444.1

Status: PROVISIONAL

Source sequence(s)

BC097521

UniProtKB/TrEMBL

A0A974CNZ4, Q4V867

Related

ENSXLAP00005050444.1, ENSXLAT00005051585.1

Conserved Domains (3) summary

COG1474
Location:24 → 204

CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]

pfam13191
Location:23 → 168

AAA_16; AAA ATPase domain

pfam14630
Location:190 → 444

ORC5_C; Origin recognition complex (ORC) subunit 5 C-terminus

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

128817741..128837394 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)