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    BTF3P13 basic transcription factor 3 pseudogene 13 [ Homo sapiens (human) ]

    Gene ID: 132556, updated on 17-Sep-2024

    Summary

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    Official Symbol
    BTF3P13provided by HGNC
    Official Full Name
    basic transcription factor 3 pseudogene 13provided by HGNC
    Primary source
    HGNC:HGNC:1128
    See related
    MIM:603739; AllianceGenome:HGNC:1128
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    BTF3L3; HUMBTFD
    Summary
    This locus defines a putative member of the BTF3 family of transcription factors and is thought to represent a pseudogene. [provided by RefSeq, Jul 2008]
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    Genomic context

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    See BTF3P13 in Genome Data Viewer
    Location:
    4q23
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (98740625..98741496)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (102055574..102056445)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (99661776..99662647)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112267901 Neighboring gene TSPAN5 divergent transcript Neighboring gene CRISPRi-validated cis-regulatory element chr4.2289 Neighboring gene CRISPRi-validated cis-regulatory element chr4.2290 Neighboring gene mitochondrial import receptor subunit TOM7 homolog Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:99668606-99669156 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:99669157-99669707 Neighboring gene uncharacterized LOC105377343 Neighboring gene Sharpr-MPRA regulatory region 12926 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:99813327-99813541 Neighboring gene eukaryotic translation initiation factor 4E Neighboring gene tubulin folding cofactor A pseudogene 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic structure of the putative BTF3 transcription factor. Kanno M, et al. Gene, 1992 Aug 15. PMID 1386332

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • basic transcription factor 3, like 3
    • basic transcription factor 3, pseudogene
    • basic transcription factor 3-like 3, pseudogene
    • lambda h33

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_006070.4 

      Range
      101..972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      98740625..98741496
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      102055574..102056445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001210.2: Suppressed sequence

      Description
      NM_001210.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
    Nucleotide Protein
    Heading Accession and Version

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