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    CG8229 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35898, updated on 2-Nov-2024

    Summary

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    Official Symbol
    CG8229provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033356
    Locus tag
    Dmel_CG8229
    See related
    AllianceGenome:FB:FBgn0033356
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8229; Uspl1l
    Summary
    Part of super elongation complex. Is expressed in several structures, including dorsal pharyngeal muscle cell; embryonic/larval fat body; gut section; larval muscle system; and posterior midgut primordium. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    all
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    Genomic context

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    See CG8229 in Genome Data Viewer
    Location:
    44F11-44F11; 2-59 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (8948113..8951086, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (4835618..4838591, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44274 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Translocase of outer membrane 7 Neighboring gene baboon

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The little elongation complex regulates small nuclear RNA transcription. Smith ER, et al. Mol Cell, 2011 Dec 23. PMID 22195968, Free PMC Article
    2. The Drosophila surface glia transcriptome: evolutionary conserved blood-brain barrier processes. DeSalvo MK, et al. Front Neurosci, 2014. PMID 25426014, Free PMC Article
    3. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing. Mazloomian A, et al. RNA Biol, 2015. PMID 26512413, Free PMC Article
    4. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047, Free PMC Article
    5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of super elongation complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8229-PD
    CG8229-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      8948113..8951086 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136588.4 → NP_610432.2  uncharacterized protein Dmel_CG8229, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610432.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7L5, Q95RJ1

    2. NM_165638.2 → NP_724730.2  uncharacterized protein Dmel_CG8229, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724730.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7L6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z7L5 A1Z7L5
    A1Z7L6 A1Z7L6
    Q95RJ1 Q95RJ1

    Gene LinkOut

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