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    LTP6 lipid transfer protein 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820024, updated on 18-Sep-2024

    Summary

    Official Symbol
    LTP6
    Official Full Name
    lipid transfer protein 6
    Primary source
    TAIR:AT3G08770
    Locus tag
    AT3G08770
    See related
    Araport:AT3G08770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    lipid transfer protein 6; LIPID TRANSFER PROTEIN 6
    Summary
    Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.
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    Genomic context

    See LTP6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (2664069..2664888, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene Protein kinase superfamily protein Neighboring gene BRISC complex subunit Abro1-like protein Neighboring gene ENTH/VHS/GAT family protein Neighboring gene ARM repeat superfamily protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001202913.1
    NM_111711.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within response to water deprivation IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    lipid transfer protein 6
    NP_001189842.1
    • lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1).
    NP_187489.1
    • lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1); Has 1107 Blast hits to 1106 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1103; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2664069..2664888 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111711.4NP_187489.1  lipid transfer protein 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187489.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2PE58, Q9LDB4
      UniProtKB/TrEMBL
      A0A178VIA8, A0A5S9XA89, A0A654F5C7
      Conserved Domains (1) summary
      cd01960
      Location:21110
      nsLTP1; Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, ...
    2. NM_001202913.1NP_001189842.1  lipid transfer protein 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189842.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F5C7, F4IXC6
      Conserved Domains (1) summary
      cd01960
      Location:21110
      nsLTP1; nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and ...