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    lyrm1 LYR motif containing 1 [ Danio rerio (zebrafish) ]

    Gene ID: 436779, updated on 12-Sep-2024

    Summary

    Official Symbol
    lyrm1provided by ZNC
    Official Full Name
    LYR motif containing 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-210
    See related
    Ensembl:ENSDARG00000026281 AllianceGenome:ZFIN:ZDB-GENE-040718-210
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92830; wu:fj36g10
    Summary
    Orthologous to human LYRM1 (LYR motif containing 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See lyrm1 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (39510735..39518618, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (39622888..39630771, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 12a Neighboring gene protein starmaker-like Neighboring gene dynein axonemal heavy chain 3 Neighboring gene defective in cullin neddylation 1 domain containing 3 Neighboring gene katanin interacting protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    LYR motif containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002506.1NP_001002506.1  LYR motif containing protein 1

      See identical proteins and their annotated locations for NP_001002506.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076293
      UniProtKB/Swiss-Prot
      Q6DGP7
      Related
      ENSDARP00000039061.7, ENSDART00000031486.9
      Conserved Domains (1) summary
      pfam05347
      Location:670
      Complex1_LYR; Complex 1 protein (LYR family)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      39510735..39518618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)