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    4930555F03Rik RIKEN cDNA 4930555F03 gene [ Mus musculus (house mouse) ]

    Gene ID: 75359, updated on 17-Aug-2024

    Summary

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    Official Symbol
    4930555F03Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930555F03 geneprovided by MGI
    Primary source
    MGI:MGI:1922609
    See related
    Ensembl:ENSMUSG00000031559 AllianceGenome:MGI:1922609
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A730024F11
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    8 B1.2; 8 27.65 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (49823921..50002076)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (49370886..49549041)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene teneurin transmembrane protein 3 Neighboring gene predicted gene, 19744 Neighboring gene STARR-seq mESC enhancer starr_21457 Neighboring gene predicted gene, 25830 Neighboring gene STARR-seq mESC enhancer starr_21458 Neighboring gene STARR-seq mESC enhancer starr_21460 Neighboring gene STARR-seq mESC enhancer starr_21462 Neighboring gene STARR-seq mESC enhancer starr_21463 Neighboring gene STARR-seq mESC enhancer starr_21464 Neighboring gene STARR-seq mESC enhancer starr_21465 Neighboring gene STARR-seq mESC enhancer starr_21466 Neighboring gene STARR-seq mESC enhancer starr_21467 Neighboring gene predicted gene 2516 Neighboring gene predicted gene, 23986

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      49823921..50002076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001778771.3 RNA Sequence

    2. XR_003947385.1 RNA Sequence

      Related
      ENSMUST00000212179.2

    3. XR_003947386.1 RNA Sequence

    4. XR_003947387.1 RNA Sequence

    5. XR_003947389.1 RNA Sequence

    6. XR_003947384.1 RNA Sequence

    7. XR_003947388.1 RNA Sequence

    8. XR_001778777.2 RNA Sequence

    9. XR_004935011.1 RNA Sequence

    10. XR_003947391.1 RNA Sequence

    11. XR_003947390.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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