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    phkg2.L phosphorylase kinase, gamma 2 (testis) L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 496328, updated on 18-Sep-2024

    Summary

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    Official Symbol
    phkg2.L
    Official Full Name
    phosphorylase kinase, gamma 2 (testis) L homeolog
    Primary source
    Xenbase:XB-GENE-994733
    Locus tag
    XELAEV_18045637mg
    See related
    EnsemblRapid:ENSXLAG00005036266
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    phkg2
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See phkg2.L in Genome Data Viewer
    Location:
    chromosome: 9_10L
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (124568777..124578656)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (113947649..113957610)

    Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene fibrosin L homeolog Neighboring gene Snf2-related CREBBP activator protein L homeolog Neighboring gene octapeptide-repeat protein T2 Neighboring gene ring finger protein 40, E3 ubiquitin protein ligase L homeolog Neighboring gene coiled-coil domain containing 42 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphorylase kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within glycogen metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of phosphorylase kinase complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    phosphorylase kinase, gamma 2 (testis) L homeolog
    NP_001088951.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001095482.1 → NP_001088951.1  phosphorylase kinase, gamma 2 (testis) L homeolog

      See identical proteins and their annotated locations for NP_001088951.1

      Status: PROVISIONAL

      Source sequence(s)
      BC088919
      UniProtKB/TrEMBL
      A0A974C0V5, Q5HZR1
      Related
      ENSXLAP00005108473.1, ENSXLAT00005110635.1
      Conserved Domains (2) summary
      cd14181
      Location:13 → 291
      STKc_PhKG2; Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit
      pfam00069
      Location:24 → 291
      Pkinase; Protein kinase domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      124568777..124578656
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials