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    bcat1.S branched chain amino-acid transaminase 1, cytosolic S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 733290, updated on 17-Aug-2024

    Summary

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    Official Symbol
    bcat1.S
    Official Full Name
    branched chain amino-acid transaminase 1, cytosolic S homeolog
    Primary source
    Xenbase:XB-GENE-17337365
    Locus tag
    XELAEV_18019708mg
    See related
    EnsemblRapid:ENSXLAG00005000313
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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    Genomic context

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    See bcat1.S in Genome Data Viewer
    Location:
    chromosome: 3S
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (1137577..1151336, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (1126266..1135409, complement)

    Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108712516 Neighboring gene uncharacterized LOC108712517 Neighboring gene SRY-box 5 S homeolog Neighboring gene inositol 1,4,5-triphosphate receptor associated 2 S homeolog Neighboring gene KRAS proto-oncogene, GTPase S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    branched-chain-amino-acid aminotransferase, cytosolic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      1137577..1151336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041587843.1 → XP_041443777.1  branched-chain-amino-acid aminotransferase, cytosolic

      UniProtKB/TrEMBL
      A0A8J1MPV3, Q4KLW2
      Related
      ENSXLAP00005000853.1, ENSXLAT00005000884.1
      Conserved Domains (1) summary
      PRK13357
      Location:94 → 445
      PRK13357; branched-chain amino acid aminotransferase; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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