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    crym.S crystallin mu S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 447114, updated on 18-Sep-2024

    Summary

    Official Symbol
    crym.S
    Official Full Name
    crystallin mu S homeolog
    Primary source
    Xenbase:XB-GENE-17334370
    Locus tag
    XELAEV_18047637mg
    See related
    EnsemblRapid:ENSXLAG00005007760
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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    Genomic context

    See crym.S in Genome Data Viewer
    Location:
    chromosome: 9_10S
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (97281553..97299460)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (90633673..90651584)

    Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene modulator of smoothened S homeolog Neighboring gene ubiquinol-cytochrome c reductase core protein 2 S homeolog Neighboring gene ankyrin repeat and sterile alpha motif domain containing 4B S homeolog Neighboring gene uncharacterized LOC108702310

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC85331

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables thiomorpholine-carboxylate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables thyroid hormone binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within thyroid hormone metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001093823.2NP_001087292.1  crystallin mu S homeolog

      See identical proteins and their annotated locations for NP_001087292.1

      Status: PROVISIONAL

      Source sequence(s)
      BC078518
      UniProtKB/TrEMBL
      A0A974C0I6, A0A974H1L6, Q66KY1
      Related
      ENSXLAP00005022199.1, ENSXLAT00005022890.1
      Conserved Domains (2) summary
      pfam02423
      Location:13312
      OCD_Mu_crystall; Ornithine cyclodeaminase/mu-crystallin family
      cl21454
      Location:13312
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      97281553..97299460
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)