dnajc3.L DnaJ heat shock protein family (Hsp40) member C3 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: dnajc3.L
Official Full Name: DnaJ heat shock protein family (Hsp40) member C3 L homeolog
Primary source: Xenbase:XB-GENE-997049
Locus tag: XELAEV_18013139mg
See related: EnsemblRapid:ENSXLAG00005000617
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cg8286; dnajc3
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Genomic context

Location:: chromosome: 2L

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (127357015..127398142, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (121473806..121514831, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables misfolded protein binding	IEA Inferred from Electronic Annotation more info
enables protein-folding chaperone binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein folding in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within response to unfolded protein	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: DnaJ heat shock protein family (Hsp40) member C3 L homeolog

Names: DnaJ (Hsp40) homolog, subfamily C, member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086630.1 → NP_001080099.1 DnaJ heat shock protein family (Hsp40) member C3 L homeolog precursor

See identical proteins and their annotated locations for NP_001080099.1

Status: PROVISIONAL

Source sequence(s)

BC044037

UniProtKB/TrEMBL

A0A974DNX6, Q7ZY02

Related

ENSXLAP00005001742.1, ENSXLAT00005001783.1

Conserved Domains (6) summary

COG0457
Location:121 → 395

TPR; Tetratricopeptide (TPR) repeat [General function prediction only]

COG0484
Location:392 → 499

DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

sd00006
Location:37 → 65

TPR; TPR repeat [structural motif]

pfam00226
Location:394 → 459

DnaJ; DnaJ domain

pfam00515
Location:73 → 104

TPR_1; Tetratricopeptide repeat

pfam13414
Location:73 → 136

TPR_11; TPR repeat

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

127357015..127398142 complement

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GenBank, FASTA, Sequence Viewer (Graphics)