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    psmb5.L proteasome subunit beta 5 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100127332, updated on 17-Aug-2024

    Summary

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    Official Symbol
    psmb5.L
    Official Full Name
    proteasome subunit beta 5 L homeolog
    Primary source
    Xenbase:XB-GENE-975052
    Locus tag
    XELAEV_18007059mg
    See related
    EnsemblRapid:ENSXLAG00005028906
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    lmpx; psmb5
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    Genomic context

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    See psmb5.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (151432945..151437559, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (138560115..138564731, complement)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene HAUS augmin like complex subunit 4 L homeolog Neighboring gene chromosome 1 C14orf93 homolog L homeolog Neighboring gene proteasome (prosome, macropain) subunit, beta type, 11 L homeolog Neighboring gene cadherin 24 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables threonine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of proteasome complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    proteasome subunit beta type-5
    Names
    proteasome (prosome, macropain) subunit, beta type, 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      151432945..151437559 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018259506.2 → XP_018114995.1  proteasome subunit beta type-5

      UniProtKB/TrEMBL
      A0A1L8HYU0, A0A974I4T4, A9JS79
      Related
      ENSXLAP00005086158.1, ENSXLAT00005087820.1
    Nucleotide Protein Strain
    Heading Accession and Version

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