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    znf182 zinc finger protein 182 [ Xenopus laevis (African clawed frog) ]

    Gene ID: 779019, updated on 4-Nov-2022

    Summary

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    Gene symbol
    znf182
    Gene description
    zinc finger protein 182
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    nzfp
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    Genomic context

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    See znf182 in Genome Data Viewer
    Location:
    chromosome: 9_10S
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (114461178..114465758, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016702692.1 (277..1019)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016734745.1 (1..480, complement)

    Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene oocyte zinc finger protein XlCOF8.4-like Neighboring gene uncharacterized LOC121399134 Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene uncharacterized LOC121399133 Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene Gastrula zinc finger protein XlCGF53.1 L homeolog Neighboring gene histone H4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary conserved modules associated with zinc fingers in Xenopus laevis. Knöchel W, et al. Proc Natl Acad Sci U S A, 1989 Aug. PMID 2503827, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    zinc finger protein 182
    Names
    negatively regulating zinc finger protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001096703.1 → NP_001090172.1  zinc finger protein 182

      See identical proteins and their annotated locations for NP_001090172.1

      Status: PROVISIONAL

      Source sequence(s)
      AY211520
      UniProtKB/TrEMBL
      Q7T246
      Conserved Domains (5) summary
      COG5048
      Location:300 → 481
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:436 → 456
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:490 → 512
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:533 → 556
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:99 → 132
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      114461178..114465758 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041577878.1 → XP_041433812.1  zinc finger protein 182 isoform X1

      UniProtKB/TrEMBL
      Q7T246
      Conserved Domains (5) summary
      COG5048
      Location:300 → 481
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:436 → 456
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:490 → 512
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:533 → 556
      zf-H2C2_2; Zinc-finger double domain
      cl02581
      Location:99 → 132
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

    2. XM_041577879.1 → XP_041433813.1  zinc finger protein 182 isoform X2

      UniProtKB/TrEMBL
      A0A8J1LWE3
      Conserved Domains (4) summary
      COG5048
      Location:254 → 435
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:468 → 547
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:390 → 410
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02581
      Location:53 → 86
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    Nucleotide Protein Strain
    Heading Accession and Version

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