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    srsf3.S serine/arginine-rich splicing factor 3 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380152, updated on 17-Aug-2024

    Summary

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    Official Symbol
    srsf3.S
    Official Full Name
    serine/arginine-rich splicing factor 3 S homeolog
    Primary source
    Xenbase:XB-GENE-490821
    Locus tag
    XELAEV_18014700mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    sfrs3; srp20; srsf3
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    Genomic context

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    See srsf3.S in Genome Data Viewer
    Location:
    chromosome: 2S
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (46551369..46558845, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (43710964..43718349, complement)

    Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene RAB44, member RAS oncogene family S homeolog Neighboring gene cyclin-dependent kinase inhibitor 1A S homeolog Neighboring gene adenosine A1 receptor S homeolog Neighboring gene myogenin S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC52931

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 3 S homeolog; serine/arginine-rich splicing factor 3
    Names
    splicing factor, arginine serine-rich 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      46551369..46558845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041583738.1 → XP_041439672.1  serine/arginine-rich splicing factor 3 isoform X4

      UniProtKB/TrEMBL
      A0A8J1MD83
      Conserved Domains (1) summary
      cd12645
      Location:6 → 86
      RRM_SRSF3; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 3 (SRSF3)

    2. XM_041583737.1 → XP_041439671.1  serine/arginine-rich splicing factor 3 isoform X3

      UniProtKB/TrEMBL
      A0A8J1ME76
      Conserved Domains (1) summary
      cd12645
      Location:6 → 86
      RRM_SRSF3; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 3 (SRSF3)

    3. XM_041583736.1 → XP_041439670.1  serine/arginine-rich splicing factor 3 isoform X2

      UniProtKB/TrEMBL
      A0A8J1MF24
      Conserved Domains (1) summary
      cd12645
      Location:13 → 93
      RRM_SRSF3; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 3 (SRSF3)

    4. XM_041583735.1 → XP_041439669.1  serine/arginine-rich splicing factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J1MD62
      Conserved Domains (1) summary
      cd12645
      Location:13 → 93
      RRM_SRSF3; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 3 (SRSF3)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001086991.1: Suppressed sequence

      Description
      NM_001086991.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
    Nucleotide Protein Strain
    Heading Accession and Version

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