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    klf5.S KLF transcription factor 5 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 735138, updated on 17-Aug-2024

    Summary

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    Official Symbol
    klf5.S
    Official Full Name
    KLF transcription factor 5 S homeolog
    Primary source
    Xenbase:XB-GENE-490591
    Locus tag
    XELAEV_18015719mg
    See related
    EnsemblRapid:ENSXLAG00005018171
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    cklf; iklf; klf5; bteb2
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    Genomic context

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    See klf5.S in Genome Data Viewer
    Location:
    chromosome: 2S
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (118123778..118127886, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (109059722..109063830, complement)

    Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108709126 Neighboring gene KLF transcription factor 12 S homeolog Neighboring gene progesterone immunomodulatory binding factor 1 S homeolog Neighboring gene uncharacterized LOC108709777 Neighboring gene bora, aurora kinase A activator S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC115081

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in centriolar satellite IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    KLF transcription factor 5 S homeolog
    Names
    Kruppel-like factor 5 (intestinal) S homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001096595.1 → NP_001090064.1  KLF transcription factor 5 S homeolog

      See identical proteins and their annotated locations for NP_001090064.1

      Status: PROVISIONAL

      Source sequence(s)
      BC098996
      UniProtKB/TrEMBL
      A0A974HWF3, Q4KLU4
      Related
      ENSXLAP00005053599.1, ENSXLAT00005054772.1

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      118123778..118127886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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