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    rps19.S ribosomal protein S19 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380489, updated on 17-Aug-2024

    Summary

    Official Symbol
    rps19.S
    Official Full Name
    ribosomal protein S19 S homeolog
    Primary source
    Xenbase:XB-GENE-968803
    Locus tag
    XELAEV_18003966mg
    See related
    EnsemblRapid:ENSXLAG00005010634
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    rps19
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    Genomic context

    See rps19.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (104058751..104066685)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694854.1 (880865..888917, complement)

    Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene guanylate-binding protein 1-like Neighboring gene guanylate-binding protein 1 Neighboring gene cell adhesion molecule 4 S homeolog Neighboring gene oocyte zinc finger protein XlCOF26-like

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Clone Names

    • MGC68643

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within ribosomal small subunit assembly IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribosomal protein S19 S homeolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001087327.1NP_001080796.1  ribosomal protein S19 S homeolog

      See identical proteins and their annotated locations for NP_001080796.1

      Status: PROVISIONAL

      Source sequence(s)
      BC056505
      UniProtKB/TrEMBL
      A0A8J0PR28, A0A974H0B8, A0AA97PYM2, Q6PHL6
      Related
      ENSXLAP00005031383.1, ENSXLAT00005032153.1
      Conserved Domains (1) summary
      pfam01090
      Location:5141
      Ribosomal_S19e; Ribosomal protein S19e

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      104058751..104066685
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041570384.1XP_041426318.1  ribosomal protein S19 S homeolog isoform X2

      UniProtKB/TrEMBL
      A0A8J0PR28, A0A974H0B8, A0AA97PYM2, Q6PHL6
      Conserved Domains (1) summary
      pfam01090
      Location:5141
      Ribosomal_S19e; Ribosomal protein S19e
    2. XM_018241708.2XP_018097197.1  ribosomal protein S19 S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A310TRG4, A0A974H036, A0AA97PYN5
      Related
      ENSXLAP00005031393.1, ENSXLAT00005032163.1