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    tial1.L TIA1 cytotoxic granule-associated RNA binding protein-like 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 378931, updated on 17-Aug-2024

    Summary

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    Official Symbol
    tial1.L
    Official Full Name
    TIA1 cytotoxic granule-associated RNA binding protein-like 1 L homeolog
    Primary source
    Xenbase:XB-GENE-17339698
    Locus tag
    XELAEV_18034300mg
    See related
    EnsemblRapid:ENSXLAG00005035980
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    tcbp; tiar; tial1-a; tial1-b
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    Genomic context

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    See tial1.L in Genome Data Viewer
    Location:
    chromosome: 7L
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (5036443..5057806)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (5059582..5080964)

    Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate-5-phosphatase F L homeolog Neighboring gene BAG cochaperone 3 L homeolog Neighboring gene regulator of G-protein signaling 10 L homeolog Neighboring gene G protein-coupled receptor kinase 5 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of FUSE-binding proteins as interacting partners of TIA proteins. Rothé F, et al. Biochem Biophys Res Commun, 2006 Apr 28. PMID 16527256
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    nucleolysin TIAR

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      5036443..5057806
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018225001.2 → XP_018080490.1  nucleolysin TIAR isoform X1

      UniProtKB/TrEMBL
      A0A1L8FIA8, A0A974CE65, Q7ZX99
      Related
      ENSXLAP00005107641.1, ENSXLAT00005109775.1

    2. XM_041570153.1 → XP_041426087.1  nucleolysin TIAR isoform X2

      UniProtKB/TrEMBL
      A0A8J1L967
      Conserved Domains (2) summary
      TIGR01628
      Location:1 → 134
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cl17169
      Location:74 → 146
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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