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    zein-binding protein (Protein of unknown function, DUF593) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826997, updated on 18-Sep-2024

    Summary

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    Official Full Name
    zein-binding protein (Protein of unknown function, DUF593)
    Primary source
    TAIR:AT4G13630
    Locus tag
    AT4G13630
    See related
    Araport:AT4G13630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18A5.20; F18A5_20
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (7933684..7936565, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein family SERF Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Homeodomain-like superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203790.2
    NM_001340870.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    zein-binding protein (Protein of unknown function, DUF593)
    NP_001190719.1
    • Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G04890.1).
    NP_001319921.1
    • Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G04890.1); Has 608 Blast hits to 585 proteins in 84 species: Archae - 0; Bacteria - 9; Metazoa - 158; Fungi - 22; Plants - 359; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7933684..7936565 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203790.2 → NP_001190719.1  zein-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190719.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JT43, Q9SVP9
      Conserved Domains (1) summary
      pfam04576
      Location:226 → 314
      Zein-binding; Zein-binding

    2. NM_001340870.1 → NP_001319921.1  zein-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JT43, Q9SVP9
      Conserved Domains (1) summary
      pfam04576
      Location:226 → 314
      Zein-binding; Zein-binding
    Nucleotide Protein
    Heading Accession and Version

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