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    C17orf100 chromosome 17 open reading frame 100 [ Homo sapiens (human) ]

    Gene ID: 388327, updated on 17-Sep-2024

    Summary

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    Official Symbol
    C17orf100provided by HGNC
    Official Full Name
    chromosome 17 open reading frame 100provided by HGNC
    Primary source
    HGNC:HGNC:34494
    See related
    Ensembl:ENSG00000256806 AllianceGenome:HGNC:34494
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Orthologs
    mouse all
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    Genomic context

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    See C17orf100 in Genome Data Viewer
    Location:
    17p13.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (6651762..6653476)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (6552391..6554105)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (6555082..6556795)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene KIAA0753 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6540081-6540863 Neighboring gene uncharacterized LOC122526780 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6540864-6541645 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11584 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:6543558-6544439 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11585 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11586 Neighboring gene thioredoxin domain containing 17 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11587 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11588 Neighboring gene mediator complex subunit 31 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11589 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8077 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8078 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6558426-6558998 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6560276-6560912 Neighboring gene microRNA 4520-1 Neighboring gene microRNA 4520-2 Neighboring gene arachidonate 15-lipoxygenase pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Find tests for this gene in the NIH Genetic Testing Registry (GTR)

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein C17orf100
    Names
    hCG1985469

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105520.2 → NP_001098990.1  uncharacterized protein C17orf100

      See identical proteins and their annotated locations for NP_001098990.1

      Status: VALIDATED

      Source sequence(s)
      AC004706, BC052606, BX488537
      Consensus CDS
      CCDS73952.1
      UniProtKB/Swiss-Prot
      A8MU93, D3DTM5
      Related
      ENSP00000491070.1, ENST00000542475.3

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      6651762..6653476
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      6552391..6554105
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8MU93.2 GenPept UniProtKB/Swiss-Prot:A8MU93

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