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    GOLGA6L5P golgin A6 family like 5, pseudogene [ Homo sapiens (human) ]

    Gene ID: 374650, updated on 17-Sep-2024

    Summary

    Official Symbol
    GOLGA6L5Pprovided by HGNC
    Official Full Name
    golgin A6 family like 5, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:30472
    See related
    AllianceGenome:HGNC:30472
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GOLGA6L5; GOLGA6L8
    Expression
    Broad expression in testis (RPKM 11.5), ovary (RPKM 7.4) and 25 other tissues See more
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    Genomic context

    See GOLGA6L5P in Genome Data Viewer
    Location:
    15q25.2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (84506168..84516847, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (82258608..82269263, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (85049399..85060078, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene UBE2Q2 pseudogene 12 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:85043028-85043894 Neighboring gene dynamin 1 pseudogene 40 Neighboring gene UBE2Q2 pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 933 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6766 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6767 Neighboring gene uncharacterized LOC105370947 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9982 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6768 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:85146655-85147283 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:85152722-85153247 Neighboring gene zinc finger and SCAN domain containing 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • Golgin subfamily A member 6-like protein 8
    • golgi autoantigen, golgin subfamily a, 6-like 5 (pseudogene)
    • golgi autoantigen, golgin subfamily a, 6-like 8
    • golgi autoantigen, golgin subfamily a-like pseudogene

    Clone Names

    • FLJ35171, FLJ40113, MGC141816

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003246.4 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC048382, AW474779, BE139071, CA431034, DA284832, DB050061

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      84506168..84516847 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791797.1 Reference GRCh38.p14 PATCHES

      Range
      998014..1008693 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      82258608..82269263 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_198079.1: Suppressed sequence

      Description
      NM_198079.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene or a nonsense-mediated mRNA decay (NMD) candidate.