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    MICOS10 mitochondrial contact site and cristae organizing system subunit 10 [ Sus scrofa (pig) ]

    Gene ID: 100623381, updated on 8-Mar-2024

    Summary

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    Gene symbol
    MICOS10
    Gene description
    mitochondrial contact site and cristae organizing system subunit 10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Also known as
    MINOS1
    Expression
    Ubiquitous expression in heart (RPKM 283.6), psoas major muscle (RPKM 250.5) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See MICOS10 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (78011486..78045919)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (72084423..72118894)

    Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene capping actin protein of muscle Z-line subunit beta Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene NBL1, DAN family BMP antagonist Neighboring gene 5-hydroxytryptamine receptor 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. Comparative analysis of protein coding sequences from human, mouse and the domesticated pig. Jørgensen FG, et al. BMC Biol, 2005 Jan 28. PMID 15679890, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of MICOS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MICOS complex subunit MIC10
    Names
    mitochondrial inner membrane organizing system 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

      Range
      78011486..78045919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005656034.2 → XP_005656091.2  MICOS complex subunit MIC10

      UniProtKB/TrEMBL
      A0A481AS71
      Conserved Domains (1) summary
      pfam04418
      Location:1 → 62
      DUF543; Domain of unknown function (DUF543)
    Nucleotide Protein
    Heading Accession and Version

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