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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001097422.1 → NP_001090891.1 SPARC-like protein 1 precursor
See identical proteins and their annotated locations for NP_001090891.1
Status: PROVISIONAL
- Source sequence(s)
-
EF416571
- UniProtKB/TrEMBL
- A0A8D1VDL0, A3RIE0
- Related
- ENSSSCP00000034214.2, ENSSSCT00000063769.2
- Conserved Domains (3) summary
-
- cd00252
Location:512 → 660
- SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
- pfam10591
Location:511 → 646
- SPARC_Ca_bdg; Secreted protein acidic and rich in cysteine Ca binding region
- cl00097
Location:431 → 510
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Sscrofa11.1 Primary Assembly
Genomic
-
NC_010450.4 Reference Sscrofa11.1 Primary Assembly
- Range
-
131386804..131431427
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005667002.3 → XP_005667059.1 SPARC-like protein 1 isoform X4
- UniProtKB/TrEMBL
- A0A287BRY6, A0A8D1ALQ9, A0A8D2C7R4
- Conserved Domains (3) summary
-
- cd16231
Location:513 → 653
- EFh_SPARC_like; EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC) and similar proteins
- cl00097
Location:431 → 510
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- cl26761
Location:89 → 402
- MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
-
XM_021100260.1 → XP_020955919.1 SPARC-like protein 1 isoform X3
- UniProtKB/TrEMBL
-
A0A8D1ALQ9
- Conserved Domains (3) summary
-
- cd16231
Location:523 → 663
- EFh_SPARC_like; EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC) and similar proteins
- cl00097
Location:441 → 520
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- cl26761
Location:89 → 402
- MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
-
XM_021100261.1 → XP_020955920.1 SPARC-like protein 1 isoform X4
- UniProtKB/TrEMBL
- A0A287BRY6, A0A8D1ALQ9, A0A8D2C7R4
- Related
- ENSSSCP00000058888.3, ENSSSCT00000043019.3
- Conserved Domains (3) summary
-
- cd16231
Location:513 → 653
- EFh_SPARC_like; EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC) and similar proteins
- cl00097
Location:431 → 510
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- cl26761
Location:89 → 402
- MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
-
XM_021100258.1 → XP_020955917.1 SPARC-like protein 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8D1AQ48
- Conserved Domains (3) summary
-
- cd16231
Location:536 → 676
- EFh_SPARC_like; EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC) and similar proteins
- cl00097
Location:454 → 533
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- cl26761
Location:100 → 415
- MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
-
XM_005667001.3 → XP_005667058.1 SPARC-like protein 1 isoform X2
- UniProtKB/TrEMBL
- A0A8D1AQ48, A0A8D1YSY6
- Conserved Domains (3) summary
-
- cd00252
Location:525 → 673
- SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
- pfam10591
Location:524 → 659
- SPARC_Ca_bdg; Secreted protein acidic and rich in cysteine Ca binding region
- cl00097
Location:444 → 523
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...