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    UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI [ Sus scrofa (pig) ]

    Gene ID: 100524239, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UQCR11provided by VGNC
    Official Full Name
    ubiquinol-cytochrome c reductase, complex III subunit XIprovided by VGNC
    Primary source
    VGNC:VGNC:110224
    See related
    Ensembl:ENSSSCG00000013436
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Broad expression in heart (RPKM 594.4), psoas major muscle (RPKM 361.7) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See UQCR11 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (76903219..76906276)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (78173437..78176555, complement)

    Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 8B3 Neighboring gene one cut homeobox 3 Neighboring gene transcription factor 3 Neighboring gene methyl-CpG binding domain protein 3 Neighboring gene mex-3 RNA binding family member D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome b-c1 complex subunit 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

      Range
      76903219..76906276
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003122996.3 → XP_003123044.1  cytochrome b-c1 complex subunit 10

      UniProtKB/TrEMBL
      A0A4X1VTU3, F1SDI2
      Related
      ENSSSCP00000014285.2, ENSSSCT00000014680.4
      Conserved Domains (1) summary
      pfam08997
      Location:2 → 52
      UCR_6-4kD; Ubiquinol-cytochrome C reductase complex, 6.4kD protein
    Nucleotide Protein
    Heading Accession and Version

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