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    FAM131C family with sequence similarity 131 member C [ Sus scrofa (pig) ]

    Gene ID: 100521274, updated on 8-Mar-2024

    Summary

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    Official Symbol
    FAM131Cprovided by VGNC
    Official Full Name
    family with sequence similarity 131 member Cprovided by VGNC
    Primary source
    VGNC:VGNC:87902
    See related
    Ensembl:ENSSSCG00000003470
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Broad expression in kidney (RPKM 8.2), ovary (RPKM 8.2) and 6 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See FAM131C in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (75193397..75213081, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (69529608..69545541)

    Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene heat shock protein family B (small) member 7 Neighboring gene chloride voltage-gated channel K Neighboring gene EPH receptor A2 Neighboring gene Rho guanine nucleotide exchange factor 19

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein FAM131C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

      Range
      75193397..75213081 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021095410.1 → XP_020951069.1  protein FAM131C isoform X2

      UniProtKB/TrEMBL
      A0A4X1W7W6, A0A4X1W8U1, A0A8D0W4Y1
      Conserved Domains (1) summary
      pfam15010
      Location:76 → 235
      FAM131; Putative cell signalling

    2. XM_021095411.1 → XP_020951070.1  protein FAM131C isoform X3

      UniProtKB/TrEMBL
      A0A287A4Y7, A0A4X1W8U6, A0A8D0LZ06, F1SUT9
      Related
      ENSSSCP00000003768.4, ENSSSCT00000003856.4
      Conserved Domains (1) summary
      pfam15010
      Location:68 → 227
      FAM131; Putative cell signalling

    3. XM_021095409.1 → XP_020951068.1  protein FAM131C isoform X1

      UniProtKB/TrEMBL
      A0A287BPY6, A0A4X1W7W6, A0A8D0UGQ3, A0A8D0W4Y1
      Related
      ENSSSCP00000059601.2, ENSSSCT00000062471.2
      Conserved Domains (1) summary
      pfam15010
      Location:86 → 245
      FAM131; Putative cell signalling

    4. XM_005665034.3 → XP_005665091.1  protein FAM131C isoform X1

      UniProtKB/TrEMBL
      A0A287BPY6, A0A4X1W7W6, A0A8D0UGQ3, A0A8D0W4Y1
      Conserved Domains (1) summary
      pfam15010
      Location:86 → 245
      FAM131; Putative cell signalling
    Nucleotide Protein
    Heading Accession and Version

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