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    tara taranis [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 53562, updated on 18-Sep-2024

    Summary

    Official Symbol
    taraprovided by FlyBase
    Official Full Name
    taranisprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040071
    Locus tag
    Dmel_CG6889
    See related
    AllianceGenome:FB:FBgn0040071
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    5472; anon-WO0257455.25; CG6889; Dmel\CG6889; EP(3)3463; l(3)03881; l(3)j1C5; l(3)jlC5; SN3-1; Tara; TARA
    Summary
    Involved in several processes, including epigenetic maintenance of chromatin in transcription-competent conformation; locomotor rhythm; and wing disc dorsal/ventral pattern formation. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; ectoderm anlage; germ layer; germ layer derivative; and wing disc. Orthologous to human SERTAD2 (SERTA domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See tara in Genome Data Viewer
    Location:
    89B8-89B9; 3-58 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (16225651..16260329)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12051373..12086051)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45641 Neighboring gene long non-coding RNA:CR45643 Neighboring gene belphegor Neighboring gene asunder

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in locomotor rhythm IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sleep IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in transcription initiation-coupled chromatin remodeling IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in wing disc dorsal/ventral pattern formation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    taranis
    Names
    CG6889-PA
    CG6889-PB
    suppressor of NA9 3-1
    tara-PA
    tara-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      16225651..16260329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080255.3NP_524994.2  taranis, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524994.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NHC0, Q9NHC2, Q9VEX7
      Related
      FBpp0082711
      Conserved Domains (1) summary
      pfam06031
      Location:443480
      SERTA; SERTA motif
    2. NM_169709.2NP_732120.1  taranis, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732120.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NHB9, Q9NHC1
      Related
      FBpp0082712
      Conserved Domains (1) summary
      pfam06031
      Location:439476
      SERTA; SERTA motif